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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865060.1_cds_XP_016516200.1_28467
CDS Infomation

[gene=LOC107832821] [db_xref=GeneID:107832821] [protein=laccase-3-like] [protein_id=XP_016516200.1] [location=complement(join(2580..2710,2795..3739,3823..3951,4030..4426,4500..4610))] [gbkey=CDS]
Sequence

ATGGAGACTTCCAAAAAGGCATTGTTCAAAGTCCTATTGGCTACCACTGTGGTTATACTA
AGTCTCCTGTTTAGTTTTGCAAATGCAGATATTCACCAACATGAATTTTCTGTTCAAGAA
ACAAGAATAACAAGACTGTGCAAAACCAAGAATATAATAACAGTGAATGGACAATTCCCT
GGGCCAACGTTGACCGTTCGAAATGGGGATAAACTTGTTGTTAGGGTTGTGAATAGAGCA
CGATACAATGTTACCATTCATTGGCATGGTATTCGTCAAATGAGAACTCCATGGGCAGAT
GGACCAGAGTATGTGACACAATGTCCAATAAAACCAGGAGGAGTTTACACATACAGGTTC
ACTATTGAAGACCAAGAGGGTACATTGTGGTGGCATGCTCACAGTAGATGGCTTAGAGCT
ACTGTTTATGGGGCTCTTGTTATCTTACCAAAACAGGGTTCTCATTTTCCTTTCTCACAG
CCTAAAAAGGATATCCCTATTCTTCTTGGTGAATGGTGGAACAAAGATATTATTGTAATC
CAAAGACAAACACAGTTCACAGGAGCTGCTCCCAATATTTCTGATGCATATACTATCAAT
GGTCAACCTGGTGACCTCTATAGATGCTCTAGCCAAGATACTCTAAAGTTTTTAGTGAAT
CCTGGAGAAACAATACTCTTAAGGGTCATCAACGCTGCACTCAATCAACAACTCTTTTTC
TCAGTTGCCAACCACAAATTGATTGTGGTGGGAGCTGATGCTGCTTATAATAAGCCTTTT
ACGACGAATATTATCATGGTTGGACCTGGTCAGACCACTAATGTAATACTCACTGCTGAT
CAGCCCCCTGCACGCTATTACATGGCAGCTCGTGCCTATGCCTCAGCTCAAAATGCCCCA
TTTGACAACACTACTACCACTGCTGTTCTTGAGTACACGAATCTTAGGTCGGGAGCTAAT
TCAAGGCCTTTGTTGCCTCAGTTTCCAGCCTTTAATGACACAAATGCTGTCACGTCTTTC
ACAAGTCAAATGAGGAGCATTCCTAAAAATAATATTAAAGTACCTAATCAGATTAATGAG
AATTTGTTCTTCACTGTTGGATTAGGCTTAGTGAGTTGCACTCCTGGTCCTAGATGTCAA
GGCCCTAATAACACACGTTTTGCTGCTAGTATGAACAATGTCTCCTTTGTTTTTCCTAGA
AGAACCTCATTGCTACAAGCTTATTACCAAAACATTCCTGGGATTTATACATTGGATTTC
CCTCCTGTTCCACCTGTAAAATTTGATTATACGGGAAATGTTTCTAGAGTACTCAGGCAG
CCAGGATTTGGGACTAAGTTGTATAAGATCAAATTTGGTTCTAATGTACAAATTGTGTTA
CAAGATACTGCTATCTTCTCGGTGGAGGACCACCCAATTCATCTTCATGGATACCATTTC
TGGGTTGTTGGACAAGGTTTTGGCAACTTCAATCCACAAACTGATACTGCCAAATTTAAC
TTGAATGATCCTCCAGTTAGGAACACAATTGATGTGCCCGTCGGTGGATGGGCAGTCATT
CGTTTTGTCGCTGATAATCCTGGGGTTTGGCTGTTTCATTGCCATATTGATTCACATTTG
GCATGGGGTCTGGCTATGTCGTTCATCGTTGAAAATGGGAAAGGAGAGAAACAGACTATG
GAGCCACCTCCACCAGATCTACCACAGTGCTAG

Peptide Sequence

PEP ID

XP_016516200.1
PEP Infomation

PREDICTED: laccase-3-like [Nicotiana tabacum]
Sequence

METSKKALFKVLLATTVVILSLLFSFANADIHQHEFSVQETRITRLCKTKNIITVNGQFP
GPTLTVRNGDKLVVRVVNRARYNVTIHWHGIRQMRTPWADGPEYVTQCPIKPGGVYTYRF
TIEDQEGTLWWHAHSRWLRATVYGALVILPKQGSHFPFSQPKKDIPILLGEWWNKDIIVI
QRQTQFTGAAPNISDAYTINGQPGDLYRCSSQDTLKFLVNPGETILLRVINAALNQQLFF
SVANHKLIVVGADAAYNKPFTTNIIMVGPGQTTNVILTADQPPARYYMAARAYASAQNAP
FDNTTTTAVLEYTNLRSGANSRPLLPQFPAFNDTNAVTSFTSQMRSIPKNNIKVPNQINE
NLFFTVGLGLVSCTPGPRCQGPNNTRFAASMNNVSFVFPRRTSLLQAYYQNIPGIYTLDF
PPVPPVKFDYTGNVSRVLRQPGFGTKLYKIKFGSNVQIVLQDTAIFSVEDHPIHLHGYHF
WVVGQGFGNFNPQTDTAKFNLNDPPVRNTIDVPVGGWAVIRFVADNPGVWLFHCHIDSHL
AWGLAMSFIVENGKGEKQTMEPPPPDLPQC

Transcript Sequence

Gene sequence data has not been registered.